Phospholipids
1 glycerol + 2 fatty acids
-hooked onto glycerol and phosphate groups
-have phosphate head and lipid tail
-Head: hydrophillic(love water)
-Tail: hydrophobic( hate water)
Pyrimidines VS Purines
-Pyrimidines: U, T, C
-Purines:A,G
Francisco Redi
(1668) Disproved spontaneous generation w/ meat experiment
Amino Acid Structure
Peptide Bond
Edward Jenner
(1796) Small Pox Vaccine
-Gave a little boy cow pox, after he got over it, tried to give the boy small pox and boy never got sick
- Discovered Vaccines
-Vaca: Cow in spanish
Goden Age of Microbiology
(1857-1914)
-prevention and curing diseases
-Aseptic Techniques
-Bio-genesis
-Germ Theory of Disease
Biogenesis
Living cells come from other living cells
Germ Theory of Disease
-Foreign Microbes/Mutated microbes cause sickness/ ailment
-Some thought you got sick because you deserved punishment
What is a peptide?
4-9 amino acids
-Polypeptide: 10s-1000s amino acids
Watson & Crick
(1953) -elucidated DNA structure
- Discovered DNA is a double helix
Recycling elements
-Decomposing trash, landfills, compost piles
-Convert C, O, N, P, S into forms we can use
Natural Products
-Alternative Fuels
-Antibiotics
-Alcohol
-Vaccines
-Yogurt
Cellular Respiration Cycle
1. Glucose -> 2 Pyruvic Acids
2. 2 Pyruvic Acids-> 2 Acetyle CoA + NADH/2FADH(2)
3. 2 Acetyl CoA + NADH/2FADH(2)-> Energy
Louis Pasteur
pasteurization
Heating up liquids to keep sterile
-swan neck flask
Modern Era
- Development of chemotherapy
-using chemicals for a treatment
-Developed Antibiotics
Paul Erlich
"magic bullet"
-something to kill disease yet not harm the host
-Salvarsan
Tertiary Structure
-3D Structure, not predictable
-Interactions of Amino Acid side chains ( R groups)
-Globular
Quaternary Structure
-2 or more polypeptide chains work as one unit
-globular ( hemoglobin) or fibrous ( actin and myocin)
Gene
-basic unit of heredity
-specific order of nitrogenous bases makes up 1 gene
- 10s-100s of nucleotides = 1 gene
DNA
-circular chromosomes
-genetic makeup of how we are
-determines protein sequence
Recombinant DNA Technology
-genetically enginerred food
-cloning
-insulin
Classification of life
Phylogenic tree of life
-3 domains
-6 Kingdoms
Domain, kingdom, phylum, class, order, family, genus, species
Chromosome
100s-1000s of genes make up 1 chromosome
-46 in humans
Genome
1s-10s of chromosomes = 1 genome
the human genome is 46 chromosomes
RNA
3 types
-mRNA
-messenger
-carries from DNA to ribosomes
- codes for protein sequence
-rRNA
-ribosomal
-made in the nucleolus
-tRNA
-reads mRNA
-help form proteins/correct amino acids
What are the 3 domains and the kingdoms of each?
Bacteria
-Eubacteria
Archaea
- Archaebacteria
Eukarya
- protista
-fungi
-plantae
-animalia
Prokaryote
Single-celled w/ no nucleus
Eukaryote
membrane bound organelle and nucleus
-can be 1 or more cells
Magnification
increase in apparent size of an object
Prokaryote Classification
-Shape
-Size
-Arrangement
-Food Requirements
-Chemical Testing
Subrstrate level Phosphorylation
ADP removes a phosphate directly from a substrate
Pleomorph
Changes shape
-PV (proteus vulgaris)
-Diptheria
Sprilium
spiral type shape
Comma
ex: Cholera
Spirillium
wasy, "S" shape
Fleming, Chain, Florey
-Fleming discovered penicillin
-Chain and Florey isolated and mass produced penicillin
Hooke
Built first microscope, series of lenses and mirrors
-observed cork, coined the term "cells" from monasteries
Leeuwenhoek
-built 450 microscopes (mag-300x)
-saw first living cells "Animacules"
-Cell theory
What is the order of biomolecules broken down when dieting?
1. Carbs
2. Fats
3. Proteins
Fat Metabolism
Lipids -> Fatty acids + Glycerol
enzymes= lipase
Spirochete
-Wrapped around axial filament
-Spiral
- ex lyme disease, syphillis
Star Shaped
Ex Stella
Rectangular
ex Haloarcula
-HALO= Salt loving
Prokaryotic Glycocalyses
-Sugar coat on outside bacterial wall made of sugar, carbs, and protein
Protein Metabolism
Proteins-> Amino Acids
Enzymes-peptidase(small)
protease (big)
Cell Theory
1. Cells are smallest unit of life
2. all living orgs are made of 1 or more cells
3. All cells must come from pre-existing cells
Oxidative Phosphorylation
e- are transferred from ORGANIC compounds to electron carriers ( nad+, fad+) and produce ATP throughenergy generation
PhotoPhosphorylation
get energy to make ATP through light
Spontaneous Generation
Forms of life spontaneously arise from non-living matter "POOF"
Staphylococcus
grouped together, looks like a beer pong formation
Phototaxis
can be positive or negative
pos-move towards light
neg- move away from light
Pepsin
Enzyme in stomach
Oxidation and Reduction Reactions
Go hand in hand
OXIDATION: lose an electron, produce energy
Reduction: gain an electron, lose energy
REDOX reaction
What are the 3 steps of cellular respiration?
1. Glycolysis
2. Kreb's Cycle
3. Electron Transport Chain
Glycolysis
-Substrate level phosphorylation
-Oxidation of Glucose
-Happens in cytoplasm in Euks, and Proks
-Glucose-> 2 pyruvic acids + 2 ATP+ 2NADH
-Does not require Oxygen
Purpose- split 6-c glucose into two 3-c glucose
Kreb's Cycle
2 pyruvic acids-> 2 Acetyl CoA-> 6 CO2+2ATP+ 2FADH2+8NADH + 10H+
All about creating NAD and FAD
Electron Transport Chain
NAD and FADH2 flow down the chain generating energy the way down.
Release energy as e- transfer from High to Low energy compounds
6CO2+12H+ + 10NADH +2FADH2->6H2O+ 3HATP=10NAD+ +2FAD+
EUK- miochondrial membrane
Prok- plasma membrane
Types of Prokaryotic Glycocalyse
1. Capsule
-organized
-firmly attached to cells
2. Slime Layer
-unorganized
-loosely attached to cell
Fermentation
1. After Glycolysis
2. No oxygen, no kreb's, no ECT
3.Release energy from sugar/lipids
4.Uses an organic molecule as a final electron acceptor
5.Only makes small amount of ATP
-lactic acid
-alcoholic
Lactic Acid
2NADH + 2pyruvic acids-> 2 Lactic Acids + 2NAD+
Lactobacillus
Streptococcus
-yogurt
-food spoilage
-pickles
Gram Negative Cell Wall (2)
one or few Peptidoglycan layers sandwiched between plasma membrane and outer membrane
-lipolysaccharide layer(lipids and sugars)
NO TECHOIC ACIDS
Has porin proteins
More resistant to antibiotics
Lysozymes
-Chemical produced by euks
hydrolyzes
breaks down apart NAG and NAM carb backbone in pg layer
-Saliva, Mucus, Tears
Flagellum
rotor like movement
not wavy like sperm
more circular motion
polar flagella
Monotrichous
one tail
Prokaryote Parts
1. Lipid bilayer
2. Enzymes
3. DNA
4. Ribosomes
Prokaryoute lipid bilayer
-Fluid mosaic model
-phospholipids
-proteins(for transport)
-Diffusion
-Osmosis
-Active Transport
Diffusion
-Passive movement of molecules (oxygen CO2) through cell
Amphitrichous
2 tails, one on either side
Lophotrichous
many tails coming out of one hole
Characteristics of Prokaryotes
no nucleus or oranelle
smaller in size
70s ribosomes
Circular chromosomes
no histones
peptidoglycan layer
binary fission for repro.
no carbs or sterol
Osmosis
Diffusion of water only
Alcoholic Fermentation
2 pyruvic acids-> 2 acteryaldehide + 2CO2
Acetaldehide= 2NADH and 2NAD+
Saccromyces= yeast
beer bread
anaerobic
Characteristics of Euks
nucleus and membrane bound organelle
bigger in size
single or multicellular
80s Ribosomes
no pg layer
sexual or asexual repro.
Resolution
power; to show details
light microscope = 2000x
Chemotaxis
Positive or negative
pos-move towards chemicals
neg- move away from chemicals
Fimbriae
-small protuberances
-poloar or nonpolar-few to hundreds
acts like velcro
Pili
-1 per cell
-for conjugation
-plasmid carries gene for pili creation and genes for antibiotic resistance
Steroids
fats built from cholesterol( 4 fused rings)
Find sterols in plasma membrane of FUNGI< PLANTS< ANIMALS
Proteins
-C, H, O, N, S
50% of mass of cell
amino acids have peptide bonds
Types of proteins
Enzymes
Transport( in and out of cell)
Structure( myocin and actin)
Peritrichous
many tails coming out of everywhere
Atrichous
no tail
Prok Cell wall functions
1. Transport
2. Keep from rupturing
3. Protection
4. Determines Shape
5. Anchor for flagella
6. Confers resistance to antibiotics
Gram Positive Cell walls (2)
Thick pg layer
chans of 2 sugars repeating (NAG,NAM)
HAS TECHOIC ACID
Oligosaccharides
2-20 units long
Gram negative cell wall
2 sets of rings
1-pg layer
1-membrane
Gram Positive
only 1 set of rings
Polysaccharide
more than 2 sugars, not usually sweet, straight or branched
10-100s long
ex starch
not soluble in water
Func of Prokaryotic Glycocalyse
Adhering to things
lubrication
protection from immune systems
UV protection
Taxis
Movement
Physiology of Enzymes
Temp cause reaction to go up
pH causes reactions to go up
Denaturing of proteins
Substrate concentration
Ihibitors ( competitive and Non competitive)
Endospores
can remain dormant for 1000's of years
bacilli shape only
metabolism
sum of all reactions in the body
2 types of metabolism
Catabolism
Anabolism
Scanning Electron Microscope
100,00X
beam of electrons creating a shower, to provie a 3D image
Transmission Electron Mic
200,000X
beam electrons straight through specimen
dead things only
Scanning Tunneling Electron Micros.
1,000,000,000X
Atomic Level
Nanometer scale
absolute zero-hundreds of degrees
3 types of lipids
Steroid
triglycerides
phospholipids