Ch 2: The Chemical Basis of Life
The element neon (Ne) has eight electrons in its outermost electron
shell. How many covalent bonds will Ne readily form?
none
one
two
three
none
A sodium ion (Na+) has:
gained an electron.
lost an electron.
formed an
anion.
gained a proton.
a negative charge.
lost an electron
Of the following elements, which is likely to form the least polar
covalent bonds with hydrogen?
Nitrogen
Oxygen
Carbon
Phosphorus
Hydrogen
Hydrogen
Atoms or molecules that have an orbital with a single unpaired
electron are called:
stable.
ions.
acids.
free radicals.
antioxidants.
free radicals.
Antioxidants are believed to:
cause cancer.
destroy free radicals.
break down
vitamins.
break down hydrogen peroxide.
generate free radicals.
destroy free radicals.
An enzyme that breaks down the superoxide radical (O2
-) is:
catalase.
hydrogen peroxide.
superoxide
dismutase.
vitamin C.
glutathione.
superoxide dismutase.
Atoms that have the same number of protons, but different numbers of
neutrons are said to be __________ of one another.
isotropes
isomers
isotopes
isotonics
serotopes
isotopes
The term ________ refers to atoms that differ in the number of
protons and neutrons in their nuclei.
nuclide
nucleoid
isotroid
nucloid
isoclide
nuclide
Radioisotopes or radionuclides:
contain unstable combinations of protons and
electrons.
break apart or disintegrate in order to achieve a more
unstable configuration.
can absorb particles or electromagnetic
radiation.
contain an unstable combination of protons and
neutrons.
pick up neutrons in order to achieve a more stable configuration.
contain an unstable combination of protons and neutrons
Which form of radiation emitted by a radioactive isotope consists of
electromagnetic radiation or photons?
alpha particles
beta radiation
gamma
radiation
X-rays
all of the answers
gamma radiation
What is the name of a medical therapy in which patients are exposed
to beams of radiation emitted by chunks of 60Co arranged
around in a hemisphere around a patient’s head? The beams are aimed to
converge on a single point in three dimensions, allowing the precise
targeting of a tumor deep inside the brain.
the radioincision technique
the gamma knife
technique
radiosurgery
beta radiation infusion
gamma
localization therapy
the gamma knife technique
Polar molecules are __________; nonpolar molecules are __________.
hydrophilic; hydrophilic
hydrophobic;
hydrophobic
hydrophilic; hydrophobic
hydrophobic;
hydrophilic
hydrophilic; either hydrophilic or hydrophobic
hydrophilic; hydrophobic
Which of the following characteristics does NOT apply to water?
The water molecule is asymmetric.
The water molecule
readily forms hydrophobic interactions.
The covalent bonds in
water are strongly polarized.
All three atoms in the water
molecule readily form hydrogen bonds.
Water is an excellent solvent.
The water molecule readily forms hydrophobic interactions.
Weak attractions between adjacent water molecules are:
hydrogen bonds.
polar covalent bonds.
van der Waals
forces.
ionic bonds.
hydrophobic interactions.
hydrogen bonds.
A weak attractive force between two molecules with transitory dipoles
that are very close to one another and oriented in an appropriate
manner is called:
a hydrogen bond.
a hydrophobic interaction.
a nonpolar
covalent bond.
an ionic bond.
a van der Waals force.
a van der Waals force.
The function of a buffer is to:
generate slight changes in pH.
maintain stable
pH.
create a neutral pH.
maintain stable pH.
Cytoplasm has a pH of about 7. What is the concentration, in
moles/liter, of the hydrogen ion?
7
7 x 10-7
1 x 10-7
1 x 107
7 x 10-1
1 x 10-7
As a solution becomes more acidic:
H+ concentration increases.
H+
concentration decreases.
pH increases.
pH
decreases.
H+ concentration increases and pH decreases.
H+ concentration increases and pH decreases.
The major cellular macromolecules include:
proteins, lipids, amino acids, and
polysaccharides.
proteins, amino acids, lipids, and nucleic
acids.
proteins, nucleic acids, polysaccharides, and
antibodies.
proteins, nucleic acids, polysaccharides, and
lipids.
proteins, steroids, polysaccharides, and nucleic acids.
proteins, nucleic acids, polysaccharides, and lipids.
How many electrons are in the outer shell of a carbon atom?
one
two
three
four
eight
four
_______________ are particular groupings of atoms that often behave
as a unit and give organic molecules their physical properties,
chemical reactivity, and solubility in aqueous solution.
Functional groups
Proteins
Metabolic intermediates
Polymers
Hydrocarbons
Functional Groups
Which of the following statements about functional groups is FALSE?
Most functional groups contain one or more electropositive atoms
(N, P, O, and/or S).
Most functional groups make organic
molecules more polar.
Most functional groups make organic
molecules more water soluble.
Most functional groups make organic
molecules more reactive.
Several functional groups can ionize and
become positively or negatively charged.
Most functional groups contain one or more electropositive atoms (N, P, O, and/or S).
Which of the following groups of macromolecules contains ONLY polymers?
proteins, lipids, polysaccharides
proteins, nucleic acids,
lipids
proteins, nucleic acids, polysaccharides
lipids,
nucleic acids, polysaccharides
lipids, proteins, polysaccharides,
nucleic acids
proteins, nucleic acids, polysaccharides
Cellular molecules have complex chemical structures and must be
synthesized in a step-by-step sequence beginning with specific
starting materials. Each series of chemical reactions in the cell is
called a:
chemical pathway.
degradation pathway.
synthetic
pathway.
metabolic pathway.
meditative pathway.
metabolic pathway.
What is the name of the process by which plants harvest carbon from
the CO2 in the air?
carbonization
carbon fixation
carbon
ossification
carbon respiration
carbon fixability
carbon fixation
How do some plants fix nitrogen out of the air?
They simply attach gaseous nitrogen to already existing carbon
skeletons in the chloroplasts.
They rely on symbiotic protists,
which are able to fix nitrogen out of the air.
They rely on
rhizobia, which are able to fix nitrogen out of the air.
They
rely on symbiotic viruses, which are able to fix nitrogen out of the
air.
They rely on symbiotic bacteria, called rhizobia, which are
able to fix nitrogen out of the air.
They rely on symbiotic bacteria, called rhizobia, which are able to fix nitrogen out of the air.
Rhizobia grow on the roots of legumes in structures called _________;
they invade plant cells and live inside them in specialized membrane
compartments called:
bacteroids, root nodules.
root nodules, nodulary
structures.
root nodules, bacteroids.
root nodules,
rhizobosomes.
nodulary structures, rhizobosomes.
root nodules, bacteroids.
The rhizobia bacteria convert nitrogen from the air directly into
what substance?
ammonia
acetic acid
aminopterin
proteins
nitrate
ammonia
When leguminous plants die or are harvested, the amino acids left
behind in the dead plant parts end up in the soil, where they degrade,
producing nitrate. The nitrate can be used by other plants, usually
non-leguminous plants, as a nitrogen source. This process is a farming
process known as:
crop leguminization.
no-till cultivation.
crop
rotation.
crop sensitization.
nitrogenous utilization.
crop rotation.
From where does the phosphorus that plants need in the soil normally come?
the air
other plants
the air and other plants
the
ground, where it is a component of rocks and minerals and leaches into
ground water
from insects that live in the soil and have
symbiotic relationships to the plants
the ground, where it is a component of rocks and minerals and leaches into ground water
Prions:
are a type of virus.
are a type of infectious agent
composed only of protein.
are a treatment for CJD developed by
Stanley Prusiner.
cause Alzheimer's disease.
destroy the
cells lining the gastrointestinal tract.
are a type of infectious agent composed only of protein.
Which of the following was the first protein whose tertiary structure
was determined?
hemoglobin
insulin
myoglobin
collagen
actin
myoglobin
The scientist who elucidated the three-dimensional structure of
hemoglobin is:
Max Perutz.
John Kendrew.
Frederick Sanger.
Linus
Pauling.
Robert Corey.
Max Perutz.
Molecular chaperones were originally referred to as:
chaperonins.
heat shock proteins.
Rubisco.
GroEL.
Hsp60.
heat shock proteins.
The first protein to have its amino acid sequence determined was:
hemoglobin.
beef insulin.
spider silk.
myoglobin.
keratin.
beef insulin.
Study of the proteome of a cell:
requires use of a computer to compare fingerprints of extracted
proteins to those of known proteins.
is furthered by mass
spectrometry that provides a pattern characteristic of individual
proteins.
is based on knowledge of the genome of a cell.
can
reveal changes in protein composition within a cell over
time.
all of these statements are true.
all of these statements are true.
Molecular chaperones:
are carbohydrates that attach to specific amino acids.
may
prevent growing proteins from making random, nonselective interactions
with other proteins in various cellular compartments.
direct
proteins out of the nucleus and into the cytoplasm.
direct
proteins out of the cell through the plasma membrane.
all of
these choices are true of molecular chaperones.
may prevent growing proteins from making random, nonselective interactions with other proteins in various cellular compartments.
Which one of the following statements is FALSE?
Proteins are biochemical adaptations that are subject to
evolutionary change.
Proteins with identical sequences of amino
acids must also have identical folding patterns, even when interacting
with different substances.
Small changes in amino acid sequence
may have dramatic effects on protein shape.
The greater the
evolutionary distance between two organisms, the greater the
difference in the amino acid sequences of their proteins.
Genes
that encode members of a protein family are thought to have arisen
from a single ancestral gene.
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Proteins with identical sequences of amino acids must also have identical folding patterns, even when interacting with different substances.
Distinct regions of a protein that fold independently of one another
and often function in a semi-independent manner are called:
domains.
side chains.
amino acids.
alpha ( α ) helices.
hydrophobic.
domains
The variability among polypeptides is primarily due to:
the length of the polypeptide chain.
noncovalent
interactions within the molecule.
the diverse side chains on the
different amino acids.
addition of a phosphate group.
the
addition of sulfate groups to some amino acids.
the diverse side chains on the different amino acids.
Which statement(s) are FALSE regarding site-directed mutagenesis?
It alters a DNA sequence to produce a specific change in a
translated protein.
It can be used to determine the role of a
particular residue in the folding or function of a
polypeptide.
It does not result in a change in the structure of a
protein.
It can be used to produce clinically useful
proteins.
It requires codon alteration.
It does not result in a change in the structure of a protein.
Which of the following is a pyrimidine found only in RNA?
adenine
uracil
thymine
glycine
cytosine
uracil
The study of proteins using siRNAs is MOST useful in determining:
protein structure.
protein denaturation.
changes in
protein composition within the cell over time.
the DNA sequence
that codes for a protein.
the function of a protein.
the function of a protein.
The specific linear sequence of amino acids that constitutes a
polypeptide chain is its:
primary structure.
secondary structure.
tertiary
structure.
quaternary structure.
DNA sequence.
primary structure.
Because they both associate with proteins that assist in the assembly
of their subunits, Rubisco is MOST similar to:
antibody molecules.
heat shock
proteins.
BiP.
GroES.
green fluorescent protein
(GFP).
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antibody molecules.
The tertiary structure of a protein is stabilized by:
hydrogen bonds between the atoms that form the peptide bonds of
the backbone
noncovalent interactions between side chains of
amino acids.
peptide bonds between amino and carboxyl groups on
adjacent amino acids.
an aqueous environment.
addition of
methyl groups.
noncovalent interactions between side chains of amino acids.
The process of predicting the tertiary structure of an unknown
protein by aligning its amino acids onto the corresponding amino acids
of a protein whose structure is already known is called:
denaturation.
x-ray crystallography.
chaperoning.
threading.
self-assembly.
threading.
The drug Gleevec is useful in the treatment of:
diabetes.
acromegaly.
chronic myelogenous
leukemia.
influenza.
heart disease.
chronic myelogenous leukemia.
Disulfide bridges can form between two residues of:
cysteine.
glycine.
proline.
histidine.
arginine.
cysteine.
The human genome contains:
1,000 to 2,000 genes.
10,000 to 12,000 genes.
20,000
to 22,000 genes.
100,000 to 120,000 genes.
it's impossible
to determine.
20,000 to 22,000 genes.
Spongiform encephalopathy describes all of the following diseases EXCEPT:
Kuru.
Mad cow disease.
Creutzfeld-Jakob
disease.
Alzheimer's disease.
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Alzheimer's disease.
Silk is composed of a protein containing a large amount of:
alpha (α) helix conformations.
disulfide
bridges.
proline.
beta (β) sheet
conformations.
quaternary structure.
beta (β) sheet conformations.
Ribosomal RNA:
acts as a ribozyme during protein synthesis.
is a
double-stranded helix.
carries the genetic message that is
translated at the ribosome.
retrieves amino acids and brings them
to the ribosome for incorporation into a growing protein.
does
not have double-stranded segments and complex three-dimensional structures.
acts as a ribozyme during protein synthesis.
Different versions of a protein, which are known as ________, are
adapted to function in different tissues or at different stages of development.
mutations
isoforms
families
subunits
homologous
isoforms
Saturated fatty acids lack which of the following?
single bonds between carbon atoms
a glycerol
molecule
a hydrocarbon chain
double bonds between carbon atoms
energy
double bonds between carbon atoms
Denaturation of a protein:
is the mechanism by which stabilization of the protein structure
is achieved.
can be caused by detergents, organic solvents, heat,
certain chemical compounds, or radiation.
interferes with
covalent bonding that stabilizes the protein's tertiary
structure.
does not result in loss of function of the
protein.
occurs at very low temperatures.
can be caused by detergents, organic solvents, heat, certain chemical compounds, or radiation.
Hemoglobin A1c can be measured in blood tests to track the progress
of which disease?
heart disease
liver disease
kidney disease
diabetes
anorexia
diabetes
The liver stores energy in the form of a polysaccharide called:
starch.
glycogen.
fiber.
cellulose.
glucose.
glycogen.
A shortage of cholesterol in the body could interfere with the
formation of:
progesterone.
testosterone.
cell
membranes.
estrogen.
all of the choices are correct.
all of the choices are correct.
Which one of the following polysaccharides CANNOT be digested by humans?
glucose
glycogen
cellulose
starch
amylose
cellulose
Strategies to develop medications to battle Alzheimer's disease have included:
antibiotics that prevent replication of prions.
procedures
that encourage the formation of the Ab42 peptide.
removal of the
Ab42 peptide or the amyloid deposits that it produces.
fostering
interaction between Aβ molecules to generate fibrillar
aggregates.
infecting transgenic mice with prions.
removal of the Ab42 peptide or the amyloid deposits that it produces.
Which of the following are needed to form a triacylglycerol molecule?
3 glycerol molecules
3 fatty acid molecules
3 carbon
rings
3 phosphate groups
3 trans fats
3 fatty acid molecules
In a polypeptide, when peptide bonds are formed between adjacent
amino acids:
a water molecule is gained by the carboxyl group.
the
carboxyl group of one amino acid joins with the amino group of the
adjacent amino acid, and water is lost.
the amino groups of two
adjacent amino acids are attracted by hydrogen bonds.
the
carboxyl groups of two adjacent amino acids are joined by a covalent
bond.
the protein folds into a complex shape.
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the carboxyl group of one amino acid joins with the amino group of the adjacent amino acid, and water is lost.
How many polypeptide chains comprise a hemoglobin molecule?
one
two
three
four
two or four
four
The glucose monomers of amylose are connected by
what type of linkages?
α (1 → > 6) linkages
α (1 → > 4) linkages
β (1 →
> 6) linkages
β (1 → > 4) linkages
α (4 → > 1) linkages
α (1 → > 4) linkages
The glucose monomers of cellulose are connected by
what type of linkages?
α (1 → > 6) linkages
α (1 → > 4) linkages
β (1 →
> 6) linkages
β (1 → > 4) linkages
α (4 → > 1) linkages
β (1 → > 4) linkages
What polysaccharide is found in the outer coverings of invertebrates,
like insects, spiders, and crustaceans?
glycogen
amylose
cellulose
amylopectin
chitin
chitin
Molecules having both hydrophobic and hydrophilic regions are said to be:
amphipathic.
amphoteric.
ambidextrous.
amphibian.
amphipathic.
Which of the following molecules is found in cell membranes?
triacylglycerol
phospholipids
cholesterol
proteins
phospholipids,
cholesterol, and proteins
phospholipids, cholesterol, and proteins
Which amino acid has a charge of +1?
valine
glutamic acid
lysine
serine
glutamine
lysine
Which amino acid is a polar uncharged amino acid?
arginine
phenylalanine
leucine
glycine
tyrosine
tyrosine
Which amino acid is a nonpolar amino acid?
glutamine
aspartic acid
threonine
methionine
cysteine
methionine
How do amino acids like acetylated lysine and phospohotyrosine, which
are not among the 20 amino acids that are inserted into proteins, get
into proteins?
They are inserted directly.
They are the result of the
alteration of R groups of the 20 amino acids after their incorporation
into the polypeptide.
They are the result of the alteration of R
groups of the 20 amino acids before their incorporation into the
polypeptide.
There really are more than 20 amino acids that are
inserted into proteins.
Their atoms are altered by insertion into
the polypeptide.
They are the result of the alteration of R groups of the 20 amino acids after their incorporation into the polypeptide.
Which amino acid is most likely to be found in the core of a protein?
methionine
asparagine
serine
threonine
glutamic acid
methionine
Which of the following tripeptides would be most likely to be soluble
in an organic (hydrophobic) solvent like benzene?
N - phenylalanine - alanine - glycine – C
N - leucine -
alanine - lysine - C
N - proline - phenylalanine - leucine -
C
N - arginine - lysine - proline - C
N - glutamate -
aspartate - glycine – C
N - proline - phenylalanine - leucine - C
What bond is responsible for the branch points in glycogen?
α (1
→ >4) glycosidic linkages
β (1 → >4) glycosidic
linkages
α (1 → >6) glycosidic linkages
β (1 → >6)
glycosidic linkages
3'-5' phosphodiester linkages
α (1 → >6) glycosidic linkages
The b -pleated sheet is characterized by orientation of ______ the
molecular axis.
H bonds parallel to
H bonds perpendicular to
ionic
bonds parallel to
ionic bonds perpendicular to
peptide bonds
perpendicular to
H bonds perpendicular to
Which of the following is a nucleotide?
phosphate + ribose
adenine + deoxyribose
sugar +
nitrogenous base
adenine + ribose + phosphate
guanine + phosphate
adenine + ribose + phosphate
Self-assembly of complex molecular structures was first convincingly
demonstrated in studies of:
ribosomes.
tobacco mosaic virus.
molecular chaperones.
hemoglobin.
cytoskeleton.
tobacco mosaic virus.
The scientist who first succeeded in reconstituting complete, fully
functional 30S bacterial ribosomal subunits was:
Linus Pauling.
Heinz Fraenkel-Conrat.
Stanley
Prusiner.
Masayasu Nomura.
Max Perutz.
Masayasu Nomura.