Operator
In bacterial and phage DNA, a sequence of nucleotides near the start of an operon to which an active repressor can attach. The binding of the repressor prevents RNA polymerase from attaching to the promoter and transcribing the genes of the operon
Operon
A unit of genetic function found in bacteria and phages, consisting of a promoter, and operator, and a coordinately regulated cluster of genes whose products function in a common pathway
Repressor
A protein that inhibits gene transcription. In prokaryotes, repressors bind to the DNA in or near the promoter. In Eukaryotes, the repressors, may bind to control elements within enhancers, to activators, or to other proteins in a way that blocks activators from binding to DNA
Regulatory Gene
A gene that codes for a protein, such as a repressor, that controls the transcription of another gene or group of genes
Corepressor
A small molecule that binds to a bacterial protein and changes the protein's shape, allowing it to bind to the operator and switch an operon off
Inducer
A specific small molecule that binds to a bacterial repressor protein and changes the repressor's shape so that it cannot bind to an operator; thus switching an operon on
cyclic AMP (cAMP)
Cyclic adenosine monophosphate, a ring-shaped molecule made from ATP that is a common intracellular signaling molecule (second messenger) in eukaryotic cells. It is also a regulator of some bacterial operons.
Activator
A protein that binds to DNA and stimulates gene transcription. In prokaryotes, activators bind in or near the promoter. In eukaryotes, activators generally bind to control elements in enhancers
Differential gene expression
The expression of different sets of genes by cells with the same genome
histone acetylation
The attachment of acetyl groups to certain amino acids of histone proteins
DNA methylation
The presence of methyl groups on the DNA bases (usually cytosine) of plants, animals, and fungi. Also refers to the process of adding methyl groups onto DNA bases.
epigenetic inheritance
inheritance of traits transmitted by mechanisms that do no involve the nucleotide sequence
control elements
A segment of noncoding DNA that helps regulate transcription of a gene by serving as a binding site for transcription
enhancers
A segment of eukaryotic DNA containing multiple control elements, usually located far from the gene whose transcription it regulates
Alternative RNA splicing
A type of eukaryotic gene regulation at the RNA-rpocessing level in which different mRNA molecules are produced from the same primary transcript, depending on which RNA segments are treated as exons and which an introns
microRNAs (miRNA)
A small, single-stranded RNA molecule, generated from a double stranded RNA precursor. The miRNA associates with one or more pre tines in a complex that can degrade or prevent translation of an mRNA with a complementary sequence
small interfering RNAs (siRNA)
One of multiple small, single-stranded RNA molecules generated by cellular machinery from a long, linear, double stranded RNA molecule. The siRNA associates with one or more proteins in a complex that can degrade or prevent translation of an mRNA with a complementary sequence
RNA interference (RNAi)
A mechanism for silencing the expression of specific genes. In RNAi, double-stranded RNA molecules that match the sequence of a particular gene are processed into siRNAs that either block translation or trigger the degradation of the gene's messenger RNA. This happens naturally in some cells, and can be carried out in a lab
Differentiation
The process by which a cell or group of cells becomes specialized in structure and function
morphogenesis
The development of the form of an organism and its structures
cytoplasmic determinant
a maternal substance, such as a protein or RNA, that when placed into an egg influences the course of early development by regulating the expression of genes that affect the developmental fate of cells
Induction
A process in which a group of cells or tissues influences the development of another group through close-range interactions
Determination
The progressive restriction of developmental potential in which the possible fate of each cell becomes more limited as an embryo develops. At the end of determination, a cell is committed to its fate
Pattern Formation
The development of a multicellular organism's spatial organization, the arrangement or organs and tissues in their characteristic places in three-dimensional space
Positional Information
Molecular cues that control pattern formation in an animal or plant embryonic structure by indicating a cell's location relative to the organism's body axes. These cues elicit a response by genes that regulate development
Homeotic genes
Any of the master regulatory genes that control placement and spatial organization of body parts in animals, plants, and fungi by controlling the developmental fate or groups of cells
embryonic lethal
A mutation with a phenotype leading to death of an embryo or larvae
Maternal effect gene
A gene that, when mutant in the mother, results in a mutant phenotype in the offspring, regardless of the offspring's genotype. Also called egg polarity genes, were first identified in Drosophilia
bicoid
A maternal effect gene that codes for a protein responsible for specifying the anterior end in Drosophilia
morphogen
A substance, such as Bicoid protein in Drosophilia, that provides positional information in the form of a concentration gradient along an embryonic axis
oncogenes
A gene found in viral or cellular genomes that is involved in triggering molecular events that can lead to cancer
proto-oncogenes
A normal cellular gene that has the potential to become an oncogene
tumor-surpressor genes
A gene whose protein product inhibits cell division, thereby preventing the uncontrolled cell growth that contributes to cancer
ras gene
A gene that codes for Ras, a G protein that relays a growth signal from a growth factor receptor on the plasma membrane to a cascade of protein kinases, ultimately resulting in stimulation of the cell cycle
p53 gene
A tumor-surpressor gene that codes for a specific transcription factor that promotes the synthesis of proteins that inhibit the cell cycle