Microorganisms
**invisible to the naked eye, they can be nonpathogenic and parasitic life forms.
**converts matter into simple forms through decay converting them to higher forms that can be used as nutrients.
Symbiosis or symbiont if referring to both organisms
relationship between microorganisms (indigenous flora) and humans
Mutualism, Commensalism, Parasitism
categories of symbiosis
indigenous microflora (also referred to as opportunistic pathogens)
microbes that live on the skin an inside the human body. They include bacteria, fungi, viruses, and protozoa
*harmless unless given the chance to enter the body through a surgical wound"
infection
multiplication of organisms in the tissues of a host
*may affect not only a patient but also any individual who has contact with the health care facility, including health care workers and visitors
nosocomial infection
any infection that develops while a patient is in the health care facility
**a broadened categorization - termed HAI (health care-associated infections)
25% not evident until after discharged from hospital
Mutualism
both organisms benefit from and depend on one another to a certain extent.
escherichia coli (E coli)- colonizes within the human intestine, obtains nutrients from the food that humans eat. Produces vitamin K for blood-clotting.
commensalism
one organism benefits but second organism neither benefits nor is harmed.
indigenous microflora is an example
Neutralism
subcategory of commensalism - two organisms occupy the same area with no effect on each other
Antagonism
subcategory of commensalism - one microorganism inhibits or interferes with the growth of another
example: a microbe produces waste products that are toxic to the neighboring microbes
competitive exclusion
in commensalism symbiosis the second organism is usually neither benefited or harmed. To a certain extent the second organism can be benefited if the organism is taking up space and preventing other potentially harmful microbes from colonizing.
Parasitism
one organism benefits and the host is harmed
examples: intestinal worms, nosocomial infections (UTI), and airborne viruses (common cold)
** commensal symbiosis can change to parasitism if the microbe becomes opportunistic by entering through a surgical skin incision
pathogens
microorganisms that cause an infection
UTI (staphylococcus S. aureus bacteria)
#1 nosocomial infection (HAI) - 32%
Surgical site infections
22% of HAI
pneumonia (lung infections)
15% of HAI
bloodstream infections
14% of HAI
eukaryotes
a group of how all living cells are classified - cellular structure is complex.
includes: protozoa, fungi, green, brown, and red algae, and all plant and animal cells
prokaryotes
a group of how all living cells are classified - cellular structure is less complex organisms whose organelles are not membrane bound.
bacteria
all are prokaryotes and they divide by binary fission (the division of two identical cells)
morphology
characteristics of bacteria
size, shape, and arrangement
coccoid
coccus = singular
cocci = plural
round shaped bacteria
diplococci
paired bacteria
streptococci
chain of bacteria
staphylococci
cluster of bacteria
coccobacilli
a bacterial cell intermediate in morphology between a coccus and a bacillus - rod shaped, but also short and wide that they resemble cocci which is round
bacillus
rod-shaped bacteria
spirilla
spiral-shaped bacteria
L-form
bacteria that lose normal shape due to adverse environmental conditions; once normal conditions are reestablished cells revert to normal shape.
characteristics of bacteria
morphology, growth(varies with type of agar) motility, nutritional requirements, oxygen requirements (and carbon dioxide), pathogenicity, metabolism(secretion of waste products), proteins, genetics, staining, spore forming (sporulation)
motility: characteristic of bacteria
flagella: long thin structures.. whipping motion
cilia: fine, short, hairlike extension located on the surface of the cell; rhythmic movement
oxygen requirements - characteristic of bacteria
obligate aerobes; require level of oxygen found in a typical room
microaerophiles; require oxygen but at a lower level than room air 5%
obligate anaerobes; will not grow if there is any amount of oxygen present in the environment
facultative anaerobes; able to survive in an environment that contains oxygen or no oxygen
aerotolerant anaerobes; grow best in environment without oxygen - can survive up to 15% oxygen
capnophiles; grow best in high concentrations of carbon dioxide
staining - characteristic of bacteria
simple stain; used to determine basic shape and structures of cell; single dye such as methylene blue is used and the cell is rinsed with water.
Gram stain; cells are stained with crystal violet; washed with ethanol that removes purple stain from bacteria that don't retain the stain; red dye safranin is applied; specimen is rinsed with water.
*Gram positive bacteria retain the crystal violet and therefore are purple color.
*Gram negative bacteria do not retain the crystal violet an are red from the safranin stain.
**Gram-variable bacteria, Mycobacterium tuberculosis do not consistently stain red or purple
**Acid-fast stain; used to identify bacteria classified in the genus Mycobacterium. Red dye (carbolfuchsin) is retained by acid-fast bacteria
Staphylococcus - S. aureus
******Most common post-op bacterial infection (pathogen) - SSI
gram-positive coccus - common in the flora of the skin, hair and nares of nose
toxic shock syndrome
osteomyelitis
endocarditis
Staphylococcus - S. epidermis
IV catheter infections, UTIs, prosthetic device infections, subacute bacterial infections, endocarditis
Streptococcus - S. pneumoniae
bacterial pneumonia
Streptococcus - S. pyogenes
rheumatic fever, necrotizing fasciitis, strep throat, tonsillitis, scarlet fever
Aerobic gram-negative cocci, coccobacilli
Neisseria gonorrhoeae - pelvic inflammatory disease deading to salpingitis
Moraxella catarrhalis - otitis media in children
spore forming - characteristic of bacteria
clostridium is an example
*when conditions are unfavorable(extreme temps, dry, lack of food) the genetic material of the cell is enclosed in a protein capsule
*can survive for a long time until favorable conditions are reestablished, bacteria returns to vegetative state and able to grow
*not to be confused with reproduction, it is a method of bacterial survival
*are difficult to destroy; sterilization processes must be able to kill it
Aerobic gram-positive bacilli, coccobacilli, coryneform bacilli
(B. anthracis, Listeria, monocytogenes, lactobacillus species, corynebacterium diphtheriae)
anthrax, meningitis, bacteremia, endocarditis, respiratory and cutaneous diptheria
Aerobic, microaerophile gram-negative bacilli spirochetes
Legionella pneumophila
Pontiac fever (influenza-like illness) Legionnaires' disease (severe form of pneumonia)
Aerobic, microaerophile gram-negative bacilli spirochetes
pseudomonas aeruginosa
deep-tissue health care-associated infections in patients with burns, deep puncture wounds, and open bone fractures
Aerobic, microaerophile gram-negative bacilli, spirochetes
Helicobacter pylori
chronic gastritis, stomach ulcers, peptic ulcers
Facultative anerobic gram-negative bacilli
Haemophilus influenzae
Bacterial meningitis (primary cause in infants and children), respiratory tract infections, bacterial pneumonia (elderly), septic arthritis, cellulitis, eye infections
Facultative anaerobic gram-negative bacilli
Escherichia coli
UTIs, sepsis, neonatal meningitis
Mycobacteria
Mycobacterium tuberculosis
Tuberculosis
Chlamydia
C. trachomatis
Conjunctivitis, ocular lymphogranuloma venereum, lymphogranuloma venereum, nongonococcal urethritis, postgonococcal urethritis, infant pneumonia
Tuberculosis - mycobacterium tuberculosis
transmitted through airborne droplet nuclei, usually infect the lungs but may also infect the kidneys, bone, joints, or skin.
annual testing
fit test for mask
require isolation precautions when surgical procedures are performed - PPE plus a NIOSH approved respirator
patient advised how he/she can prevent cross-contamination
Viruses
nonliving particles that are completely reliant on the host cell for survival
*obligate intracellular parasites
*replication is directed by the nucleic acid within the host cell
*contain either DNA or RNA and a protein coat that encases the nucleic acid
*depend on the protein production of the host cell; does not contain the enzymes required for the production of energy
*no antibiotics are given
Capsid
A protein covering that surrounds and protects the virus's DNA or RNA and aids in the attachment of the viral cell to the host cell
*composed of protein molecules called capsomeres
Viruses enter the body through the following methods
inhalation of respiratory droplets, exchange of body fluids, ingestion of food or water, bites by arthropod vectors
the capsid and the nucleic acid together are referred to as
nucleocapsid
Common pathogens in the OR
Hepatitis B (HBV) - blood, body fluids - liver cancer
Hepatitis C - blood-borne (silent killer - prior to 1980 no testing of blood) - liver cancer
Hepatitis D (Delta)
Human immunodeficiency Virus (HIV) - blood or other bodily fluids
Herpes simplex virus (HSV) - contact with fluid from lesions
Papillomavirus - direct contact with another person
Cytomegalovirus (CMV) - direct contact with body fluids
Cruetzfeldt-Jakob Disease (CJD) - exact mode of transmission unknown - prions (20hr) sterilization or properly dispose of instrumentation
Prion
"proteinaceous infectious particle"
do not contain DNA or RNA
changes normal PrP (a protein) from noninfectious spiral shape, alpha-helical, to the infectious folded shape called the beta-sheet
attack the brain (neurons) and cause diseases called subacute spongiform encephalopathies
**more common in animals, and include the two common forms of scrapie(disease that infects sheep and goats) and bovine spongiforms encephalopathy (commonly called mad cow disease)
in rare cases can be inherited as a mutant gene or sporadic case
CJD
20 year incubation time, mimics Alzheimer's disease, no vaccine or cure, definitive diagnosis is through histologic examination of affected brain and lymphoid tissue
WHO - recommends use of single-use, disposable instruments and the destruction of all reusable instruments
vCJD or nvCJD
a new variant strain has a younger median age of onset at 28 years of age and longer duration of symptoms of 13 -14 months
more chemical indicators of prion accumulation in the neural and lymphoid tissues
two categories of parasitic human pathogens
Unicellular protozoans and Multicellular protozoans
Parasitology
the study of invertebrates that cause disease
Helminths
metazoans category - endoparasites properly known as worms
most common worms are tapeworms, flukes, and roundworms
primary route of transmission = food or water contained eggs
also transfers by skin penetration, fecal-oral contamination, or arthropod bite
cause intestinal blockage and may rupture intestinal wall
increase in helminth infection
human mobility, immigration from Third World countries
damage of body tissues and organs to the point of surgery
example: cysticeri (Taenia solium) pork tapeworms that can migrate out of the intestinal tract and travel to muscle and brain tissue, and the eyes.
worms
Protozoa
unicellular eukaryotes
causes malaria and chronic sleeping sickness
the intestinal form of these are transmitted by fecal-oral route and are often responsible for infections in crowded environments such as day care centers and underdeveloped countries.
Entamoeba histolytica
a protozoa that causes amebic dysentery
patients who are scheduled to undergo a sigmoidoscopy or colonoscopy
Trichomonas vaginalis (T. vaginalis)
a unicellular anaerobic protozoan that is part of the normal flora of the vagina and urethra
If acidity of vagina is upset, protozoan population will grow causing trichomoniasis (usually a sexually transmitted disease)
The study of fungi
Mycology
unicellular yeast or multicellular molds and mushrooms
reproduce sexually or asexually by producing spores
Fungi
fungal diseases
called mycoses (mycosis=plural)
opportunistic pathogens that cause disease when the host is immunocompromised common in AIDS patients
The majority of fungal diseases
Bread mold
zygomycosis
rapidly progressive and destructive disease which causes extensive damage to the bone and tissues of the face. If the organism enters the bloodstream and destroys the cranial bones, the brain tissue will be invaded.
rhinocerebral zygomycosis
candida albicans
vaginal yeast infection
trench mouth (thrush)
immunocompromised patients should be monitored for infection
intraoperative guidelines for suspected CJD patients
use disposable equipment
avoid use of power instruments
use neutral zone for passing sharps
sterile attire-gloves, face shields, knee-high impervious shoe covers
clean body fluid spills with sodium hydroxide (household bleach)
specimens into specimen container, then place biohazard bag labeled properly with this disease
per surgeon's order: clean patient's head with 1 molar sodium hydroxide at the end of procedure
postoperative guidelines for suspected CJD patients
place reusable instruments in impervious container, biohazard bacs, and labels with this disease according to hospital policy (policy may be disposal)
bodily fluids in biohazard bags labeled with this disease and kept separate from other red bags; notify environmental services to collect bags.
sharps in a separate container labeled with this disease; notify environmental services to collect and incinerate container
CJD environmental cleaning protocols
decontaminate all OR surfaces with 1 molar sodium hypochlorite for 60 min.. rinse with water then give routine cleaning
visible bioburden decontaminated with 1:10 dilution of 5.25% sodium hypochlorite...followed by routine cleaning with disinfectant
most hospital infections are transmitted by bacteria (UTI), viruses, and occasionally fungi and parasites
Frequent handwashing helps to eliminate these primary agents
transmission based precautions help prevent
cross-contamination of patients when the disease process has been diagnosed
may even be required to change scrubs in the event of MRSA or VRE
Direct contact - Indirect contact - Droplet particle size(>5um) - Airborne spread particle size (<5 um)
SSI (surgical site infection) sources at the time of surgery, rather than at some point after surgery
divided into two groups:
environmental: (1) personnel, (2)the environment, and (3)contaminated instrumentation
endogenous: patient's endogenous flora
SSI sources - environmental - (1)personnel
personnel hair, skin, and nares are reservoirs of bacteria, which may be discharged in particle form into the air and therefore pose a risk of these to the patient.
gowns and drapes cover the skin on areas of the body other than the hands. The primary purpose of wearing PPE around the OR table is to provide a barrier to contamination, both from personnel to patient and from patient to personnel. This is termed surgical conscience
SSI sources - environmental - (2)environment
FOMITES
A second source of microbial transmission is through the air and through these inanimate objects that may contain infectious microorganisms including walls, floors, cabinets, furniture and equipment
SSI sources - environmental - (3)contaminated surgical instrumentation
contaminated antiseptic solutions, contaminated wound dressings, and contaminated or improperly sterilized surgical instruments
SSI sources - endogenous - patient's endogenous flora
cannot sterilize your skin
two primary sources of SSI risk to the patient:
1. encountered in contaminated procedures
2. resident (the normal) flora of the skin
Preoperative prophylaxis with antibiotics
shown to reduce SSIs
carriers of S. aureus are at particular risk for SSI
Factors that increase SSI
age: pediatric or geriatric lower immunological defenses
obesity: diminished blood flow
general health: poor health=predisposed to infection
carriers of S. aureus or MRSA: greater risk from their own flora
remote infections: other body site infections; will travel
preoperative hospitalization: duration of operative stay
preexisting illness and related treatment: rates are higher in patients with compromised immune systems from preexisting illness, patients on meds., etc.
preoperative preparations for suspected CJD patients
notify all units
remove all unnecessary equipment and supplies from the OR as possible and everything else as far from the OR table as possible
cover all OR surfaces; electrical cords with sterile plastic sleeves
Other factors that may contribute to an increased likelihood of SSI
malnutrition, tobacco use, diabetes, malignancy, immunosuppression, high staph carriers, ruptured appendix (fecal matter in the colon)
Procedure-related risk factors that increase the danger of SSI
Preoperative hair removal: use of razors carries a greater risk than the use of clippers. Blades leave many small cuts on the skin, allowing bacteria easier access for colonization. Depilatory cream is a safer alternative
Type of procedure: clean-contaminated (class II), contaminated (class III), and dirty (class IV), cases carry a higher risk of infection
Duration of procedure: longer anesthetic and operative times have an accompanying increase in time for bacterial contamination to occur, increased tissue damage, and greater immunosuppression, fatigued team members which may break sterile technique
AST recommended standards of practice
use of eye protection, laundering of scrub attire, wearing jewelry, wearing the lab coat/cover gown, hand hygiene and fingernails, head covers, shoe covers (during operation)